Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc38Q8CDN8 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Lrtm1-203ENSMUST00000224760 3060 ntBASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Gm12663-201ENSMUST00000118481 958 ntBASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Gm25343-201ENSMUST00000157460 107 ntBASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc38Q8CDN8 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc38Q8CDN8 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc38Q8CDN8 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc38Q8CDN8 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Ccdc38Q8CDN8 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gm11331-201ENSMUST00000119764 288 ntBASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gm15197-201ENSMUST00000120526 478 ntBASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gm3828-201ENSMUST00000121817 257 ntBASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gm6485-201ENSMUST00000160676 439 ntBASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gm37852-201ENSMUST00000193027 350 ntBASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms