Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Gm12943-201ENSMUST00000119616 210 ntBASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Gm9081-201ENSMUST00000182346 991 ntBASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Gm29067-201ENSMUST00000190821 470 ntBASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Gm43912-201ENSMUST00000204352 538 ntBASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.67□□□□□ -0.38
Vps53Q8CCB4 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm12791-201ENSMUST00000120788 655 ntBASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm24074-201ENSMUST00000158178 260 ntBASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm23694-201ENSMUST00000179335 110 ntBASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Mir7051-201ENSMUST00000184167 73 ntBASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm5302-201ENSMUST00000202130 796 ntBASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps53Q8CCB4 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm13445-201ENSMUST00000121664 307 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gm11354-201ENSMUST00000121974 422 ntBASIC12.65□□□□□ -0.38
Vps53Q8CCB4 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps53Q8CCB4 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms