Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh8Q7TSK3 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh8Q7TSK3 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.75□□□□□ -0.69
Pcdh8Q7TSK3 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm23612-201ENSMUST00000103823 110 ntBASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm15196-201ENSMUST00000121406 482 ntBASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm23576-201ENSMUST00000179918 110 ntBASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 BC106175-202ENSMUST00000219344 1213 ntBASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm7589-201ENSMUST00000085631 534 ntBASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh8Q7TSK3 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Gm12463-201ENSMUST00000118271 849 ntBASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Gm15036-201ENSMUST00000118880 400 ntBASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Gm12712-201ENSMUST00000120676 801 ntBASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Gm18801-201ENSMUST00000186616 536 ntBASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Gm43249-201ENSMUST00000200464 458 ntBASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh8Q7TSK3 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms