Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Vps54Q5SPW0 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm44086-201ENSMUST00000203251 2349 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Gm11801-201ENSMUST00000117807 746 ntBASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Gm16518-201ENSMUST00000117960 508 ntBASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Gm20392-201ENSMUST00000173047 701 ntBASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps54Q5SPW0 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm23612-201ENSMUST00000103823 110 ntBASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm11919-201ENSMUST00000117609 721 ntBASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm15003-201ENSMUST00000118884 446 ntBASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm11573-201ENSMUST00000119956 394 ntBASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm11980-201ENSMUST00000121445 986 ntBASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm23576-201ENSMUST00000179918 110 ntBASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm37301-201ENSMUST00000195412 568 ntBASIC12.98□□□□□ -0.33
Vps54Q5SPW0 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps54Q5SPW0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms