Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Tctex1d1-206ENSMUST00000169211 1000 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm8494-201ENSMUST00000178171 1233 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm43575-201ENSMUST00000196420 516 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 AU022133-201ENSMUST00000200601 873 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm44741-201ENSMUST00000207503 2127 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm32025-201ENSMUST00000217960 307 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Chchd1-203ENSMUST00000224633 557 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Eml1-202ENSMUST00000109857 2627 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Stk38l-202ENSMUST00000111644 2274 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Pitrm1-207ENSMUST00000222485 3906 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Aldoart1-201ENSMUST00000078617 2052 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Acox3-201ENSMUST00000068563 3386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Hacl1-214ENSMUST00000167175 1739 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm26773-201ENSMUST00000180772 2868 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm38336-201ENSMUST00000193040 2549 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Ccnc-201ENSMUST00000065928 3484 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Adgrl3-209ENSMUST00000119385 4905 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Rufy4-201ENSMUST00000080167 2306 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Hnrnpk-221ENSMUST00000177497 2585 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Fam124b-201ENSMUST00000058748 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Col19a1-201ENSMUST00000051344 3336 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm43318-201ENSMUST00000199939 1949 ntBASIC8.84□□□□□ -0.99
Trim63Q38HM4 Slc7a9-201ENSMUST00000032703 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Art4-201ENSMUST00000032341 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Pfkm-202ENSMUST00000163507 2816 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm11500-201ENSMUST00000118237 601 ntBASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm15920-201ENSMUST00000118998 402 ntBASIC8.84□□□□□ -0.99
Trim63Q38HM4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC8.84□□□□□ -0.99
Trim63Q38HM4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm25661-201ENSMUST00000157704 296 ntBASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm26308-201ENSMUST00000157768 69 ntBASIC8.84□□□□□ -0.99
Trim63Q38HM4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm4857-201ENSMUST00000192718 785 ntBASIC8.84□□□□□ -0.99
Trim63Q38HM4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Cnga3-204ENSMUST00000195272 2197 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm44405-201ENSMUST00000198952 126 ntBASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm42859-201ENSMUST00000199572 193 ntBASIC8.84□□□□□ -0.99
Trim63Q38HM4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Olfr169-202ENSMUST00000215040 2316 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Rasgrf1-203ENSMUST00000189545 4766 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Scml2-202ENSMUST00000074802 3440 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Usp28-203ENSMUST00000213874 4109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trim63Q38HM4 Gm45416-201ENSMUST00000209713 2201 ntBASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms