Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.06□□□□□ -0.64
Ebf1Q07802 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.05□□□□□ -0.64
Ebf1Q07802 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.05□□□□□ -0.64
Ebf1Q07802 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.05□□□□□ -0.64
Ebf1Q07802 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.05□□□□□ -0.64
Ebf1Q07802 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Gm19918-201ENSMUST00000194858 400 ntBASIC11.05□□□□□ -0.64
Ebf1Q07802 Gm9353-201ENSMUST00000200472 604 ntBASIC11.05□□□□□ -0.64
Ebf1Q07802 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Gm45527-201ENSMUST00000211052 774 ntBASIC11.05□□□□□ -0.64
Ebf1Q07802 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.05□□□□□ -0.64
Ebf1Q07802 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.05□□□□□ -0.64
Ebf1Q07802 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ebf1Q07802 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.05□□□□□ -0.64
Ebf1Q07802 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.04□□□□□ -0.64
Ebf1Q07802 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Mir181d-201ENSMUST00000102383 72 ntBASIC11.04□□□□□ -0.64
Ebf1Q07802 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Gm24279-201ENSMUST00000104236 131 ntBASIC11.04□□□□□ -0.64
Ebf1Q07802 Gm23769-201ENSMUST00000104441 121 ntBASIC11.04□□□□□ -0.64
Ebf1Q07802 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.04□□□□□ -0.64
Ebf1Q07802 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Gm19927-201ENSMUST00000185792 781 ntBASIC11.04□□□□□ -0.64
Ebf1Q07802 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.04□□□□□ -0.64
Ebf1Q07802 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.04□□□□□ -0.64
Ebf1Q07802 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.04□□□□□ -0.64
Ebf1Q07802 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.04□□□□□ -0.64
Ebf1Q07802 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms