Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Gm6677-201ENSMUST00000195100 441 ntBASIC11.14□□□□□ -0.63
Ybx1P62960 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Gm42689-201ENSMUST00000202403 404 ntBASIC11.14□□□□□ -0.63
Ybx1P62960 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.14□□□□□ -0.63
Ybx1P62960 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Ybx1P62960 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.14□□□□□ -0.63
Ybx1P62960 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.14□□□□□ -0.63
Ybx1P62960 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Gm25514-201ENSMUST00000083860 135 ntBASIC11.14□□□□□ -0.63
Ybx1P62960 Gm10233-201ENSMUST00000089275 628 ntBASIC11.14□□□□□ -0.63
Ybx1P62960 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.14□□□□□ -0.63
Ybx1P62960 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Ybx1P62960 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ybx1P62960 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.14□□□□□ -0.63
Ybx1P62960 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Ybx1P62960 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ybx1P62960 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.13□□□□□ -0.63
Ybx1P62960 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Ybx1P62960 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.13□□□□□ -0.63
Ybx1P62960 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.13□□□□□ -0.63
Ybx1P62960 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC11.13□□□□□ -0.63
Ybx1P62960 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Ybx1P62960 Mir6359-201ENSMUST00000183668 81 ntBASIC11.13□□□□□ -0.63
Ybx1P62960 Gm27316-201ENSMUST00000184884 277 ntBASIC11.13□□□□□ -0.63
Ybx1P62960 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Gm33707-201ENSMUST00000195135 569 ntBASIC11.13□□□□□ -0.63
Ybx1P62960 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.13□□□□□ -0.63
Ybx1P62960 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.13□□□□□ -0.63
Ybx1P62960 Gm9619-201ENSMUST00000211587 762 ntBASIC11.13□□□□□ -0.63
Ybx1P62960 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.13□□□□□ -0.63
Ybx1P62960 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ybx1P62960 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.13□□□□□ -0.63
Ybx1P62960 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.13□□□□□ -0.63
Ybx1P62960 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ybx1P62960 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ybx1P62960 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.12□□□□□ -0.63
Ybx1P62960 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ybx1P62960 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ybx1P62960 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ybx1P62960 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Ybx1P62960 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Ybx1P62960 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms