Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Lsm6P62313 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.54□□□□□ -0.88
Lsm6P62313 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm6P62313 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Rims2-204ENSMUST00000226410 3685 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Lsm6P62313 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Lsm6P62313 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.53□□□□□ -0.88
Lsm6P62313 Gm26013-201ENSMUST00000104404 119 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.53□□□□□ -0.88
Lsm6P62313 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.53□□□□□ -0.88
Lsm6P62313 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.53□□□□□ -0.88
Lsm6P62313 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Gm11451-201ENSMUST00000118946 630 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 Gm12029-201ENSMUST00000120073 832 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Lsm6P62313 Gm18753-201ENSMUST00000201000 566 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC9.53□□□□□ -0.88
Lsm6P62313 Gm19091-201ENSMUST00000208120 978 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 Gm45118-201ENSMUST00000208928 825 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 Gm9102-201ENSMUST00000219250 465 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Lsm6P62313 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.53□□□□□ -0.88
Lsm6P62313 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.53□□□□□ -0.88
Lsm6P62313 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Lsm6P62313 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Gm38312-201ENSMUST00000195426 1746 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.53□□□□□ -0.88
Lsm6P62313 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Lsm6P62313 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm6P62313 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Lsm6P62313 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.52□□□□□ -0.88
Lsm6P62313 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Lsm6P62313 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Lsm6P62313 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Lsm6P62313 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC9.52□□□□□ -0.88
Lsm6P62313 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.52□□□□□ -0.89
Lsm6P62313 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.52□□□□□ -0.89
Lsm6P62313 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Lsm6P62313 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Lsm6P62313 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Lsm6P62313 Gm5944-201ENSMUST00000118182 1001 ntBASIC9.52□□□□□ -0.89
Lsm6P62313 Gm15131-201ENSMUST00000119124 595 ntBASIC9.52□□□□□ -0.89
Lsm6P62313 n-R5s84-201ENSMUST00000122591 109 ntBASIC9.52□□□□□ -0.89
Lsm6P62313 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.52□□□□□ -0.89
Lsm6P62313 Gm22138-201ENSMUST00000158748 128 ntBASIC9.52□□□□□ -0.89
Lsm6P62313 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC9.52□□□□□ -0.89
Lsm6P62313 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm6P62313 Gm4812-201ENSMUST00000182847 993 ntBASIC9.52□□□□□ -0.89
Lsm6P62313 Gm6677-201ENSMUST00000195100 441 ntBASIC9.52□□□□□ -0.89
Lsm6P62313 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms