Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Nup43P59235 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.26□□□□□ -0.77
Nup43P59235 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.26□□□□□ -0.77
Nup43P59235 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nup43P59235 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Nup43P59235 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.26□□□□□ -0.77
Nup43P59235 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nup43P59235 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nup43P59235 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nup43P59235 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nup43P59235 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nup43P59235 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.26□□□□□ -0.77
Nup43P59235 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.26□□□□□ -0.77
Nup43P59235 Gm13333-201ENSMUST00000119424 781 ntBASIC10.26□□□□□ -0.77
Nup43P59235 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.26□□□□□ -0.77
Nup43P59235 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.26□□□□□ -0.77
Nup43P59235 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.26□□□□□ -0.77
Nup43P59235 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Gm37301-201ENSMUST00000195412 568 ntBASIC10.26□□□□□ -0.77
Nup43P59235 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.26□□□□□ -0.77
Nup43P59235 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Gm18514-201ENSMUST00000218980 436 ntBASIC10.26□□□□□ -0.77
Nup43P59235 Capsl-202ENSMUST00000226688 739 ntBASIC10.26□□□□□ -0.77
Nup43P59235 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.26□□□□□ -0.77
Nup43P59235 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Gm5805-201ENSMUST00000072779 456 ntBASIC10.26□□□□□ -0.77
Nup43P59235 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nup43P59235 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nup43P59235 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nup43P59235 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nup43P59235 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nup43P59235 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Gm25053-201ENSMUST00000103982 133 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Gm25922-201ENSMUST00000104281 130 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Gm25562-201ENSMUST00000104608 133 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Gm15074-201ENSMUST00000117603 936 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.25□□□□□ -0.77
Nup43P59235 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.25□□□□□ -0.77
Nup43P59235 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.25□□□□□ -0.77
Nup43P59235 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.25□□□□□ -0.77
Nup43P59235 Gm24679-201ENSMUST00000158762 111 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nup43P59235 Gm8492-201ENSMUST00000182375 987 ntBASIC10.25□□□□□ -0.77
Nup43P59235 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms