Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.04□□□□□ -0.48
Tpm1P58771 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Tpm1P58771 Gm15374-201ENSMUST00000119313 844 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 Gm9089-201ENSMUST00000122027 526 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.04□□□□□ -0.48
Tpm1P58771 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.04□□□□□ -0.48
Tpm1P58771 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.04□□□□□ -0.48
Tpm1P58771 Gm23694-201ENSMUST00000179335 110 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Gm7003-201ENSMUST00000195089 312 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.04□□□□□ -0.48
Tpm1P58771 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.04□□□□□ -0.48
Tpm1P58771 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 Ntng1-201ENSMUST00000051253 327 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Gm10020-201ENSMUST00000081993 612 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Gm42571-201ENSMUST00000201197 2464 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC12.04□□□□□ -0.48
Tpm1P58771 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Tpm1P58771 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC12.04□□□□□ -0.48
Tpm1P58771 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.04□□□□□ -0.48
Tpm1P58771 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Tpm1P58771 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.04□□□□□ -0.48
Tpm1P58771 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Gm44798-201ENSMUST00000208123 2410 ntBASIC12.03□□□□□ -0.48
Tpm1P58771 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC12.03□□□□□ -0.48
Tpm1P58771 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.03□□□□□ -0.48
Tpm1P58771 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm12218-201ENSMUST00000117666 399 ntBASIC12.03□□□□□ -0.48
Tpm1P58771 Gm11244-201ENSMUST00000121243 237 ntBASIC12.03□□□□□ -0.48
Tpm1P58771 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.03□□□□□ -0.48
Tpm1P58771 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm9540-201ENSMUST00000188230 478 ntBASIC12.03□□□□□ -0.48
Tpm1P58771 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm43852-201ENSMUST00000202098 917 ntBASIC12.03□□□□□ -0.48
Tpm1P58771 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.03□□□□□ -0.48
Tpm1P58771 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.03□□□□□ -0.48
Tpm1P58771 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.03□□□□□ -0.48
Tpm1P58771 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC12.03□□□□□ -0.48
Tpm1P58771 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tpm1P58771 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.03□□□□□ -0.48
Tpm1P58771 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC12.03□□□□□ -0.48
Tpm1P58771 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Tpm1P58771 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.03□□□□□ -0.48
Tpm1P58771 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.03□□□□□ -0.48
Tpm1P58771 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tpm1P58771 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tpm1P58771 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tpm1P58771 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tpm1P58771 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tpm1P58771 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Tpm1P58771 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Tpm1P58771 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tpm1P58771 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms