Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC12.19□□□□□ -0.46
Rrp1P56183 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.19□□□□□ -0.46
Rrp1P56183 Gm11956-201ENSMUST00000119525 512 ntBASIC12.19□□□□□ -0.46
Rrp1P56183 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.19□□□□□ -0.46
Rrp1P56183 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.19□□□□□ -0.46
Rrp1P56183 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.19□□□□□ -0.46
Rrp1P56183 Gm37826-201ENSMUST00000195329 322 ntBASIC12.19□□□□□ -0.46
Rrp1P56183 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.19□□□□□ -0.46
Rrp1P56183 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.19□□□□□ -0.46
Rrp1P56183 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.19□□□□□ -0.46
Rrp1P56183 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.19□□□□□ -0.46
Rrp1P56183 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.19□□□□□ -0.46
Rrp1P56183 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rrp1P56183 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rrp1P56183 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC12.19□□□□□ -0.46
Rrp1P56183 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rrp1P56183 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Gm28693-201ENSMUST00000189622 2638 ntBASIC12.19□□□□□ -0.46
Rrp1P56183 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rrp1P56183 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rrp1P56183 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rrp1P56183 Phtf1os-201ENSMUST00000160110 4046 ntBASIC12.18□□□□□ -0.46
Rrp1P56183 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.18□□□□□ -0.46
Rrp1P56183 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Rrp1P56183 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Gm11411-201ENSMUST00000117951 719 ntBASIC12.18□□□□□ -0.46
Rrp1P56183 Gm15554-201ENSMUST00000120406 913 ntBASIC12.18□□□□□ -0.46
Rrp1P56183 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.18□□□□□ -0.46
Rrp1P56183 Gm25661-201ENSMUST00000157704 296 ntBASIC12.18□□□□□ -0.46
Rrp1P56183 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.18□□□□□ -0.46
Rrp1P56183 Gm44551-201ENSMUST00000208804 171 ntBASIC12.18□□□□□ -0.46
Rrp1P56183 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.18□□□□□ -0.46
Rrp1P56183 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.18□□□□□ -0.46
Rrp1P56183 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rrp1P56183 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.18□□□□□ -0.46
Rrp1P56183 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC12.18□□□□□ -0.46
Rrp1P56183 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rrp1P56183 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC12.18□□□□□ -0.46
Rrp1P56183 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC12.18□□□□□ -0.46
Rrp1P56183 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rrp1P56183 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rrp1P56183 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC12.17□□□□□ -0.46
Rrp1P56183 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rrp1P56183 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Rrp1P56183 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.17□□□□□ -0.46
Rrp1P56183 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 Gm16518-201ENSMUST00000117960 508 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Gm8737-201ENSMUST00000122208 642 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.17□□□□□ -0.46
Rrp1P56183 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.17□□□□□ -0.46
Rrp1P56183 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms