Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 AC117648.1-201ENSMUST00000219777 2510 ntBASIC10.34□□□□□ -0.75
Cdkn2bP55271 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Gm25076-201ENSMUST00000104098 132 ntBASIC10.33□□□□□ -0.76
Cdkn2bP55271 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Gm3828-201ENSMUST00000121817 257 ntBASIC10.33□□□□□ -0.76
Cdkn2bP55271 Gm4726-201ENSMUST00000135604 736 ntBASIC10.33□□□□□ -0.76
Cdkn2bP55271 Gm6019-201ENSMUST00000148369 736 ntBASIC10.33□□□□□ -0.76
Cdkn2bP55271 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Mir6927-201ENSMUST00000184494 71 ntBASIC10.33□□□□□ -0.76
Cdkn2bP55271 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Gm7319-201ENSMUST00000210047 778 ntBASIC10.33□□□□□ -0.76
Cdkn2bP55271 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.33□□□□□ -0.76
Cdkn2bP55271 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.33□□□□□ -0.76
Cdkn2bP55271 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.33□□□□□ -0.76
Cdkn2bP55271 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.33□□□□□ -0.76
Cdkn2bP55271 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.33□□□□□ -0.76
Cdkn2bP55271 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdkn2bP55271 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gm7357-201ENSMUST00000195361 2991 ntBASIC10.32□□□□□ -0.76
Cdkn2bP55271 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.32□□□□□ -0.76
Cdkn2bP55271 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC10.32□□□□□ -0.76
Cdkn2bP55271 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gm45867-201ENSMUST00000208201 2317 ntBASIC10.32□□□□□ -0.76
Cdkn2bP55271 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdkn2bP55271 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gm25343-201ENSMUST00000157460 107 ntBASIC10.32□□□□□ -0.76
Cdkn2bP55271 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdkn2bP55271 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gm37458-201ENSMUST00000194055 410 ntBASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gm17831-201ENSMUST00000205579 900 ntBASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gm8162-201ENSMUST00000213951 665 ntBASIC10.32□□□□□ -0.76
Cdkn2bP55271 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.32□□□□□ -0.76
Cdkn2bP55271 Id2-203ENSMUST00000222667 958 ntBASIC10.32□□□□□ -0.76
Cdkn2bP55271 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdkn2bP55271 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms