Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm11960-201ENSMUST00000122068 925 ntBASIC10.85□□□□□ -0.67
Atxn1P54254 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.85□□□□□ -0.67
Atxn1P54254 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Gm20495-201ENSMUST00000173902 235 ntBASIC10.85□□□□□ -0.67
Atxn1P54254 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC10.85□□□□□ -0.67
Atxn1P54254 Gm38103-201ENSMUST00000191707 864 ntBASIC10.85□□□□□ -0.67
Atxn1P54254 Gm43002-201ENSMUST00000200310 155 ntBASIC10.85□□□□□ -0.67
Atxn1P54254 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.85□□□□□ -0.67
Atxn1P54254 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Atxn1P54254 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.85□□□□□ -0.67
Atxn1P54254 AC118639.1-202ENSMUST00000226957 653 ntBASIC10.85□□□□□ -0.67
Atxn1P54254 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Atxn1P54254 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Atxn1P54254 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Atxn1P54254 Gm7701-201ENSMUST00000163185 1479 ntBASIC10.85□□□□□ -0.67
Atxn1P54254 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Atxn1P54254 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.85□□□□□ -0.67
Atxn1P54254 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Atxn1P54254 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.84□□□□□ -0.67
Atxn1P54254 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.84□□□□□ -0.67
Atxn1P54254 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.84□□□□□ -0.67
Atxn1P54254 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Atxn1P54254 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Gm13426-201ENSMUST00000117887 795 ntBASIC10.84□□□□□ -0.67
Atxn1P54254 Gm9133-201ENSMUST00000118289 540 ntBASIC10.84□□□□□ -0.67
Atxn1P54254 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.84□□□□□ -0.67
Atxn1P54254 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Gm17782-201ENSMUST00000174345 880 ntBASIC10.84□□□□□ -0.67
Atxn1P54254 Gm5808-201ENSMUST00000178090 357 ntBASIC10.84□□□□□ -0.67
Atxn1P54254 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Atxn1P54254 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.84□□□□□ -0.67
Atxn1P54254 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.84□□□□□ -0.67
Atxn1P54254 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.84□□□□□ -0.67
Atxn1P54254 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Atxn1P54254 Lect2-202ENSMUST00000225183 823 ntBASIC10.84□□□□□ -0.67
Atxn1P54254 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Atxn1P54254 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.84□□□□□ -0.67
Atxn1P54254 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.84□□□□□ -0.67
Atxn1P54254 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Atxn1P54254 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.84□□□□□ -0.67
Atxn1P54254 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Atxn1P54254 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Atxn1P54254 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atxn1P54254 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Atxn1P54254 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Atxn1P54254 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Atxn1P54254 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Atxn1P54254 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Atxn1P54254 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Atxn1P54254 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Atxn1P54254 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atxn1P54254 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms