Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
ClgnP52194 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
ClgnP52194 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
ClgnP52194 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
ClgnP52194 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.12□□□□□ -0.63
ClgnP52194 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.12□□□□□ -0.63
ClgnP52194 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
ClgnP52194 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.12□□□□□ -0.63
ClgnP52194 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.12□□□□□ -0.63
ClgnP52194 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.12□□□□□ -0.63
ClgnP52194 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.12□□□□□ -0.63
ClgnP52194 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.12□□□□□ -0.63
ClgnP52194 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC11.12□□□□□ -0.63
ClgnP52194 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
ClgnP52194 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
ClgnP52194 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC11.12□□□□□ -0.63
ClgnP52194 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ClgnP52194 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ClgnP52194 AC115746.1-201ENSMUST00000228949 3617 ntBASIC11.11□□□□□ -0.63
ClgnP52194 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
ClgnP52194 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.11□□□□□ -0.63
ClgnP52194 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
ClgnP52194 Snord17-201ENSMUST00000104526 238 ntBASIC11.11□□□□□ -0.63
ClgnP52194 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
ClgnP52194 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.11□□□□□ -0.63
ClgnP52194 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Gm13422-201ENSMUST00000118834 504 ntBASIC11.11□□□□□ -0.63
ClgnP52194 Gm20426-201ENSMUST00000173657 440 ntBASIC11.11□□□□□ -0.63
ClgnP52194 Mir5132-201ENSMUST00000175166 71 ntBASIC11.11□□□□□ -0.63
ClgnP52194 Gm37458-201ENSMUST00000194055 410 ntBASIC11.11□□□□□ -0.63
ClgnP52194 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.11□□□□□ -0.63
ClgnP52194 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.11□□□□□ -0.63
ClgnP52194 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.11□□□□□ -0.63
ClgnP52194 Gm18753-201ENSMUST00000201000 566 ntBASIC11.11□□□□□ -0.63
ClgnP52194 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.11□□□□□ -0.63
ClgnP52194 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.11□□□□□ -0.63
ClgnP52194 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.11□□□□□ -0.63
ClgnP52194 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ClgnP52194 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.11□□□□□ -0.63
ClgnP52194 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.11□□□□□ -0.63
ClgnP52194 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.11□□□□□ -0.63
ClgnP52194 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ClgnP52194 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ClgnP52194 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.11□□□□□ -0.63
ClgnP52194 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
ClgnP52194 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
ClgnP52194 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
ClgnP52194 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClgnP52194 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms