Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Rfx3P48381 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.8□□□□□ -0.84
Rfx3P48381 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rfx3P48381 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Rfx3P48381 Spata33-207ENSMUST00000212760 4074 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rfx3P48381 Gm11949-201ENSMUST00000117640 372 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 Gm13422-201ENSMUST00000118834 504 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 Gm13408-201ENSMUST00000119822 798 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 Gm13935-201ENSMUST00000121859 798 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.8□□□□□ -0.84
Rfx3P48381 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.8□□□□□ -0.84
Rfx3P48381 Gm24514-201ENSMUST00000174961 285 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Gm9211-201ENSMUST00000182882 975 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.8□□□□□ -0.84
Rfx3P48381 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.8□□□□□ -0.84
Rfx3P48381 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 AC159819.2-201ENSMUST00000216151 342 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC9.8□□□□□ -0.84
Rfx3P48381 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.8□□□□□ -0.84
Rfx3P48381 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Rfx3P48381 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.8□□□□□ -0.84
Rfx3P48381 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Rfx3P48381 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC9.8□□□□□ -0.84
Rfx3P48381 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Rfx3P48381 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rfx3P48381 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rfx3P48381 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Rfx3P48381 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.79□□□□□ -0.84
Rfx3P48381 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC9.79□□□□□ -0.84
Rfx3P48381 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Rfx3P48381 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rfx3P48381 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Gm3372-201ENSMUST00000198806 1792 ntBASIC9.79□□□□□ -0.84
Rfx3P48381 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.79□□□□□ -0.84
Rfx3P48381 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.79□□□□□ -0.84
Rfx3P48381 Gm25226-201ENSMUST00000158198 123 ntBASIC9.79□□□□□ -0.84
Rfx3P48381 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rfx3P48381 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Rfx3P48381 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Rfx3P48381 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Rfx3P48381 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rfx3P48381 Gm5523-201ENSMUST00000180415 997 ntBASIC9.79□□□□□ -0.84
Rfx3P48381 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
Rfx3P48381 Gm3508-201ENSMUST00000186012 792 ntBASIC9.79□□□□□ -0.84
Rfx3P48381 Gm44100-201ENSMUST00000204329 436 ntBASIC9.79□□□□□ -0.84
Rfx3P48381 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.79□□□□□ -0.84
Rfx3P48381 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.79□□□□□ -0.84
Rfx3P48381 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms