Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.62□□□□□ -0.71
BrafP28028 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
BrafP28028 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Snord17-201ENSMUST00000104526 238 ntBASIC10.62□□□□□ -0.71
BrafP28028 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.62□□□□□ -0.71
BrafP28028 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.62□□□□□ -0.71
BrafP28028 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.62□□□□□ -0.71
BrafP28028 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.62□□□□□ -0.71
BrafP28028 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Gm25492-201ENSMUST00000157383 129 ntBASIC10.62□□□□□ -0.71
BrafP28028 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.62□□□□□ -0.71
BrafP28028 Gm20426-201ENSMUST00000173657 440 ntBASIC10.62□□□□□ -0.71
BrafP28028 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
BrafP28028 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.62□□□□□ -0.71
BrafP28028 Gm3551-201ENSMUST00000190750 664 ntBASIC10.62□□□□□ -0.71
BrafP28028 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
BrafP28028 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.62□□□□□ -0.71
BrafP28028 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
BrafP28028 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
BrafP28028 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.62□□□□□ -0.71
BrafP28028 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
BrafP28028 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC10.62□□□□□ -0.71
BrafP28028 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
BrafP28028 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
BrafP28028 Gm44798-201ENSMUST00000208123 2410 ntBASIC10.62□□□□□ -0.71
BrafP28028 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.61□□□□□ -0.71
BrafP28028 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.61□□□□□ -0.71
BrafP28028 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
BrafP28028 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.61□□□□□ -0.71
BrafP28028 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
BrafP28028 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.61□□□□□ -0.71
BrafP28028 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.61□□□□□ -0.71
BrafP28028 Gm15374-201ENSMUST00000119313 844 ntBASIC10.61□□□□□ -0.71
BrafP28028 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Gm15881-201ENSMUST00000148792 942 ntBASIC10.61□□□□□ -0.71
BrafP28028 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Gm6485-201ENSMUST00000160676 439 ntBASIC10.61□□□□□ -0.71
BrafP28028 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.61□□□□□ -0.71
BrafP28028 Gm21778-201ENSMUST00000178779 471 ntBASIC10.61□□□□□ -0.71
BrafP28028 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.61□□□□□ -0.71
BrafP28028 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.61□□□□□ -0.71
BrafP28028 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.61□□□□□ -0.71
BrafP28028 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.61□□□□□ -0.71
BrafP28028 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.61□□□□□ -0.71
BrafP28028 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
BrafP28028 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
BrafP28028 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC10.61□□□□□ -0.71
BrafP28028 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
BrafP28028 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
BrafP28028 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Gm45597-201ENSMUST00000211524 1994 ntBASIC10.61□□□□□ -0.71
BrafP28028 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
BrafP28028 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
BrafP28028 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
BrafP28028 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.6□□□□□ -0.71
BrafP28028 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
BrafP28028 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
BrafP28028 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
BrafP28028 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
BrafP28028 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC10.6□□□□□ -0.71
BrafP28028 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
BrafP28028 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms