Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC8.8□□□□□ -1
Cdx1P18111 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC8.8□□□□□ -1
Cdx1P18111 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cdx1P18111 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC8.8□□□□□ -1
Cdx1P18111 AC144938.1-201ENSMUST00000223994 2167 ntBASIC8.8□□□□□ -1
Cdx1P18111 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Cdx1P18111 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC8.8□□□□□ -1
Cdx1P18111 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cdx1P18111 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cdx1P18111 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 Gm44914-201ENSMUST00000207191 2720 ntBASIC8.8□□□□□ -1
Cdx1P18111 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Cdx1P18111 Gm42979-201ENSMUST00000196287 2228 ntBASIC8.8□□□□□ -1
Cdx1P18111 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Cdx1P18111 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx1P18111 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cdx1P18111 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cdx1P18111 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cdx1P18111 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Gm19409-201ENSMUST00000198244 2858 ntBASIC8.79□□□□□ -1
Cdx1P18111 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Gm43127-201ENSMUST00000195890 2789 ntBASIC8.79□□□□□ -1
Cdx1P18111 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Traf7-215ENSMUST00000176652 3003 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Cdx1P18111 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Gm43615-201ENSMUST00000197465 1773 ntBASIC8.79□□□□□ -1
Cdx1P18111 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Cdx1P18111 Add2-210ENSMUST00000205034 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Cdx1P18111 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC8.79□□□□□ -1
Cdx1P18111 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC8.79□□□□□ -1
Cdx1P18111 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC8.79□□□□□ -1
Cdx1P18111 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC8.79□□□□□ -1
Cdx1P18111 Gm12196-201ENSMUST00000120954 262 ntBASIC8.79□□□□□ -1
Cdx1P18111 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC8.79□□□□□ -1
Cdx1P18111 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC8.79□□□□□ -1
Cdx1P18111 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 H2-Q3-201ENSMUST00000172583 608 ntBASIC8.79□□□□□ -1
Cdx1P18111 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Mir7032-201ENSMUST00000185154 79 ntBASIC8.79□□□□□ -1
Cdx1P18111 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Gm6905-201ENSMUST00000205729 511 ntBASIC8.79□□□□□ -1
Cdx1P18111 AC133602.1-201ENSMUST00000227510 509 ntBASIC8.79□□□□□ -1
Cdx1P18111 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC8.79□□□□□ -1
Cdx1P18111 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Gm26448-201ENSMUST00000082446 203 ntBASIC8.79□□□□□ -1
Cdx1P18111 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
Cdx1P18111 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC8.79□□□□□ -1
Cdx1P18111 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC8.79□□□□□ -1
Cdx1P18111 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx1P18111 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC8.79□□□□□ -1
Cdx1P18111 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Cdx1P18111 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Gm37806-201ENSMUST00000194524 6387 ntBASIC8.78□□□□□ -1
Cdx1P18111 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Txk-206ENSMUST00000198464 2271 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Cdx1P18111 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx1P18111 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms