Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Fv4P11370 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Fv4P11370 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.45□□□□□ -0.74
Fv4P11370 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.45□□□□□ -0.74
Fv4P11370 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Fv4P11370 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.45□□□□□ -0.74
Fv4P11370 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.45□□□□□ -0.74
Fv4P11370 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.45□□□□□ -0.74
Fv4P11370 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.45□□□□□ -0.74
Fv4P11370 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.45□□□□□ -0.74
Fv4P11370 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.45□□□□□ -0.74
Fv4P11370 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.45□□□□□ -0.74
Fv4P11370 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.45□□□□□ -0.74
Fv4P11370 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.45□□□□□ -0.74
Fv4P11370 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.45□□□□□ -0.74
Fv4P11370 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.45□□□□□ -0.74
Fv4P11370 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Fv4P11370 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.45□□□□□ -0.74
Fv4P11370 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.45□□□□□ -0.74
Fv4P11370 Gm9369-201ENSMUST00000196009 733 ntBASIC10.45□□□□□ -0.74
Fv4P11370 Gm43671-201ENSMUST00000200422 433 ntBASIC10.45□□□□□ -0.74
Fv4P11370 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Fv4P11370 Gm45310-201ENSMUST00000210436 275 ntBASIC10.45□□□□□ -0.74
Fv4P11370 Gm8162-201ENSMUST00000213951 665 ntBASIC10.45□□□□□ -0.74
Fv4P11370 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Fv4P11370 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Fv4P11370 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Fv4P11370 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.45□□□□□ -0.74
Fv4P11370 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Fv4P11370 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.44□□□□□ -0.74
Fv4P11370 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.44□□□□□ -0.74
Fv4P11370 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.44□□□□□ -0.74
Fv4P11370 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.44□□□□□ -0.74
Fv4P11370 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.44□□□□□ -0.74
Fv4P11370 Gm18466-201ENSMUST00000209147 499 ntBASIC10.44□□□□□ -0.74
Fv4P11370 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.44□□□□□ -0.74
Fv4P11370 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.44□□□□□ -0.74
Fv4P11370 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC10.44□□□□□ -0.74
Fv4P11370 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Fv4P11370 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Fv4P11370 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.44□□□□□ -0.74
Fv4P11370 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms