Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Mir7011-201ENSMUST00000183768 73 ntBASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Platr10-202ENSMUST00000191479 818 ntBASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Gm6342-201ENSMUST00000204344 766 ntBASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Arl15-202ENSMUST00000224068 1002 ntBASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 AC108416.3-201ENSMUST00000226148 557 ntBASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 AC140426.1-201ENSMUST00000227933 459 ntBASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc188F6WEU2 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm25561-201ENSMUST00000104607 125 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm14332-201ENSMUST00000121982 899 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm5710-201ENSMUST00000183020 995 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Mir7115-201ENSMUST00000184275 64 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm43674-201ENSMUST00000196313 791 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm18122-201ENSMUST00000211390 904 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm18623-201ENSMUST00000219860 953 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm5910-201ENSMUST00000211819 1746 ntBASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc188F6WEU2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc188F6WEU2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc188F6WEU2 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Ccdc188F6WEU2 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.93□□□□□ -0.66
Ccdc188F6WEU2 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc188F6WEU2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc188F6WEU2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Ccdc188F6WEU2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc188F6WEU2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.93□□□□□ -0.66
Ccdc188F6WEU2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms