Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Gm17070-201ENSMUST00000170463 784 ntBASIC14.25□□□□□ -0.13
U2af1Q9D883 Gm20392-201ENSMUST00000173047 701 ntBASIC14.25□□□□□ -0.13
U2af1Q9D883 n-R5s130-201ENSMUST00000178128 119 ntBASIC14.25□□□□□ -0.13
U2af1Q9D883 Gm24312-201ENSMUST00000178677 119 ntBASIC14.25□□□□□ -0.13
U2af1Q9D883 n-R5s106-201ENSMUST00000179060 119 ntBASIC14.25□□□□□ -0.13
U2af1Q9D883 Gm26272-201ENSMUST00000179241 132 ntBASIC14.25□□□□□ -0.13
U2af1Q9D883 n-R5s118-201ENSMUST00000179887 119 ntBASIC14.25□□□□□ -0.13
U2af1Q9D883 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Gm27441-201ENSMUST00000185000 105 ntBASIC14.25□□□□□ -0.13
U2af1Q9D883 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Gm37852-201ENSMUST00000193027 350 ntBASIC14.25□□□□□ -0.13
U2af1Q9D883 Gm43460-201ENSMUST00000202491 1057 ntBASIC14.25□□□□□ -0.13
U2af1Q9D883 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
U2af1Q9D883 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC14.25□□□□□ -0.13
U2af1Q9D883 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Gm14005-210ENSMUST00000225087 1413 ntBASIC14.24□□□□□ -0.13
U2af1Q9D883 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Gm11578-201ENSMUST00000118530 459 ntBASIC14.24□□□□□ -0.13
U2af1Q9D883 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Gm12969-201ENSMUST00000120199 1004 ntBASIC14.24□□□□□ -0.13
U2af1Q9D883 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
U2af1Q9D883 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC14.24□□□□□ -0.13
U2af1Q9D883 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Gm7593-201ENSMUST00000187246 644 ntBASIC14.24□□□□□ -0.13
U2af1Q9D883 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Gm37860-201ENSMUST00000195380 1034 ntBASIC14.24□□□□□ -0.13
U2af1Q9D883 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
U2af1Q9D883 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
U2af1Q9D883 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
U2af1Q9D883 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
U2af1Q9D883 Gm37031-201ENSMUST00000195487 2530 ntBASIC14.23□□□□□ -0.13
U2af1Q9D883 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.23□□□□□ -0.13
U2af1Q9D883 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
U2af1Q9D883 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
U2af1Q9D883 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
U2af1Q9D883 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
U2af1Q9D883 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
U2af1Q9D883 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
U2af1Q9D883 Gm21142-201ENSMUST00000179999 2604 ntBASIC14.23□□□□□ -0.13
U2af1Q9D883 Gm37422-201ENSMUST00000193794 4718 ntBASIC14.23□□□□□ -0.13
U2af1Q9D883 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
U2af1Q9D883 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.23□□□□□ -0.13
U2af1Q9D883 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
U2af1Q9D883 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
U2af1Q9D883 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
U2af1Q9D883 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
U2af1Q9D883 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms