Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Snord17-201ENSMUST00000104526 238 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gm15636-201ENSMUST00000119205 668 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gm28671-201ENSMUST00000187036 692 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 AC140314.1-201ENSMUST00000219549 554 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 AC154461.1-201ENSMUST00000224207 1005 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gm25514-201ENSMUST00000083860 135 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx6-1Q99MA9 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm11540-201ENSMUST00000117457 780 ntBASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm11473-201ENSMUST00000118980 359 ntBASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm14006-201ENSMUST00000122132 981 ntBASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm14126-201ENSMUST00000122345 395 ntBASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm17782-201ENSMUST00000174345 880 ntBASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Mir8111-201ENSMUST00000184463 137 ntBASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm43117-201ENSMUST00000198531 379 ntBASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 AC124613.1-201ENSMUST00000198711 88 ntBASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm42867-201ENSMUST00000202995 469 ntBASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm43966-201ENSMUST00000203301 612 ntBASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx6-1Q99MA9 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms