Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.58□□□□□ -0.88
Scrt1Q99M85 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.58□□□□□ -0.88
Scrt1Q99M85 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Gm6612-201ENSMUST00000170777 395 ntBASIC9.58□□□□□ -0.88
Scrt1Q99M85 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Gm20781-201ENSMUST00000193154 693 ntBASIC9.58□□□□□ -0.88
Scrt1Q99M85 Gm21736-201ENSMUST00000195399 693 ntBASIC9.58□□□□□ -0.88
Scrt1Q99M85 Gm42751-201ENSMUST00000198065 559 ntBASIC9.58□□□□□ -0.88
Scrt1Q99M85 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 AC102847.1-202ENSMUST00000226313 1245 ntBASIC9.58□□□□□ -0.88
Scrt1Q99M85 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.58□□□□□ -0.88
Scrt1Q99M85 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.58□□□□□ -0.88
Scrt1Q99M85 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.58□□□□□ -0.88
Scrt1Q99M85 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Scrt1Q99M85 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Scrt1Q99M85 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Scrt1Q99M85 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.57□□□□□ -0.88
Scrt1Q99M85 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.57□□□□□ -0.88
Scrt1Q99M85 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Scrt1Q99M85 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Scrt1Q99M85 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.57□□□□□ -0.88
Scrt1Q99M85 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.57□□□□□ -0.88
Scrt1Q99M85 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Scrt1Q99M85 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Scrt1Q99M85 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Scrt1Q99M85 AC137950.2-202ENSMUST00000227150 1635 ntBASIC9.57□□□□□ -0.88
Scrt1Q99M85 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Scrt1Q99M85 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Scrt1Q99M85 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Scrt1Q99M85 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Scrt1Q99M85 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Scrt1Q99M85 AC022682.1-201ENSMUST00000224624 2023 ntBASIC9.57□□□□□ -0.88
Scrt1Q99M85 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
Scrt1Q99M85 Gm8152-201ENSMUST00000120842 637 ntBASIC9.57□□□□□ -0.88
Scrt1Q99M85 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Scrt1Q99M85 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms