Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm13422-201ENSMUST00000118834 504 ntBASIC9.91□□□□□ -0.82
Lims1Q99JW4 Gm8737-201ENSMUST00000122208 642 ntBASIC9.91□□□□□ -0.82
Lims1Q99JW4 n-R5s14-201ENSMUST00000122688 107 ntBASIC9.91□□□□□ -0.82
Lims1Q99JW4 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.91□□□□□ -0.82
Lims1Q99JW4 Mt1-202ENSMUST00000211807 1085 ntBASIC9.91□□□□□ -0.82
Lims1Q99JW4 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.91□□□□□ -0.82
Lims1Q99JW4 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm11949-201ENSMUST00000117640 372 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm15554-201ENSMUST00000120406 913 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm5244-201ENSMUST00000164001 339 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm44545-201ENSMUST00000208262 746 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.9□□□□□ -0.82
Lims1Q99JW4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lims1Q99JW4 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.9□□□□□ -0.83
Lims1Q99JW4 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Lims1Q99JW4 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lims1Q99JW4 AC124561.1-202ENSMUST00000228652 1929 ntBASIC9.9□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms