Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm17132-201ENSMUST00000109542 1158 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm13999-201ENSMUST00000141511 969 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm8815-201ENSMUST00000173809 620 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm28937-201ENSMUST00000185413 695 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm29400-201ENSMUST00000187208 695 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm28662-201ENSMUST00000188446 695 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm28251-201ENSMUST00000188835 695 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm21287-201ENSMUST00000191377 696 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm37318-201ENSMUST00000194325 695 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm7343-201ENSMUST00000194510 1061 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm38017-201ENSMUST00000194768 695 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm37287-201ENSMUST00000195449 695 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm37793-201ENSMUST00000195548 695 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm43044-201ENSMUST00000198091 379 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 CT009721.1-201ENSMUST00000213590 770 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm7594-201ENSMUST00000218595 871 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm15500-201ENSMUST00000071523 894 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Pfdn4-202ENSMUST00000075087 816 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm10229-201ENSMUST00000089106 570 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 AC183268.1-201ENSMUST00000215753 2837 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb17Q91VD8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Gm7851-201ENSMUST00000117574 323 ntBASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Psph-202ENSMUST00000118268 785 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Gm11357-201ENSMUST00000119758 954 ntBASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Gm11941-201ENSMUST00000119904 610 ntBASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Gm11960-201ENSMUST00000122068 925 ntBASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdhb17Q91VD8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms