Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm17826-201ENSMUST00000189720 798 ntBASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Gm11952-201ENSMUST00000121172 821 ntBASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Gm25343-201ENSMUST00000157460 107 ntBASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Gm37299-201ENSMUST00000193951 826 ntBASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cchcr1Q8K2I2 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Gm10731-201ENSMUST00000181171 448 ntBASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Gm7467-201ENSMUST00000185173 652 ntBASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Gm25580-201ENSMUST00000083409 327 ntBASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms