Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm12337-201ENSMUST00000119634 400 ntBASIC13.35□□□□□ -0.27
Trim52Q8CDV4 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm4430-202ENSMUST00000193902 1041 ntBASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm44304-201ENSMUST00000200509 145 ntBASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.35□□□□□ -0.27
Trim52Q8CDV4 AC241616.1-201ENSMUST00000213741 166 ntBASIC13.35□□□□□ -0.27
Trim52Q8CDV4 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 AC140314.1-201ENSMUST00000219549 554 ntBASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm4930-201ENSMUST00000219926 1087 ntBASIC13.35□□□□□ -0.27
Trim52Q8CDV4 AC154431.1-201ENSMUST00000224910 880 ntBASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim52Q8CDV4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm14148-201ENSMUST00000122433 1008 ntBASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm26943-201ENSMUST00000182295 957 ntBASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm37944-201ENSMUST00000194233 414 ntBASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm3791-201ENSMUST00000220790 768 ntBASIC13.34□□□□□ -0.27
Trim52Q8CDV4 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 AC133496.1-201ENSMUST00000223891 743 ntBASIC13.34□□□□□ -0.27
Trim52Q8CDV4 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.34□□□□□ -0.27
Trim52Q8CDV4 AC107711.4-201ENSMUST00000228948 440 ntBASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm38034-201ENSMUST00000193915 2069 ntBASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim52Q8CDV4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.33□□□□□ -0.27
Trim52Q8CDV4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trim52Q8CDV4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trim52Q8CDV4 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim52Q8CDV4 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms