Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm12935-201ENSMUST00000119352 246 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm11591-201ENSMUST00000120063 702 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm25052-201ENSMUST00000122661 158 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim35Q8C006 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim35Q8C006 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm13402-201ENSMUST00000153600 424 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm29453-201ENSMUST00000186428 1279 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Itpa-ps2-201ENSMUST00000188629 589 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm28066-201ENSMUST00000188657 472 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm19587-201ENSMUST00000191395 545 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm33626-201ENSMUST00000206790 828 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm30155-201ENSMUST00000223458 339 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 AC167140.1-201ENSMUST00000224710 403 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Sntg1-202ENSMUST00000115488 1554 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm37772-201ENSMUST00000191635 1394 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 AC154197.1-201ENSMUST00000225136 1382 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.67□□□□□ -0.38
Trim35Q8C006 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Hrh4-201ENSMUST00000041676 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim35Q8C006 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Gm23111-201ENSMUST00000122652 105 ntBASIC12.66□□□□□ -0.38
Trim35Q8C006 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC12.66□□□□□ -0.38
Trim35Q8C006 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Gm38231-201ENSMUST00000192030 347 ntBASIC12.66□□□□□ -0.38
Trim35Q8C006 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Gm19184-201ENSMUST00000196798 928 ntBASIC12.66□□□□□ -0.38
Trim35Q8C006 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Gm34611-201ENSMUST00000223252 627 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim35Q8C006 AC154747.2-201ENSMUST00000225109 780 ntBASIC12.66□□□□□ -0.38
Trim35Q8C006 AC154426.1-201ENSMUST00000225614 1132 ntBASIC12.66□□□□□ -0.38
Trim35Q8C006 AC106830.2-201ENSMUST00000226624 943 ntBASIC12.66□□□□□ -0.38
Trim35Q8C006 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Cd1d2-201ENSMUST00000041920 1243 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim35Q8C006 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.66□□□□□ -0.38
Trim35Q8C006 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim35Q8C006 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms