Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Gm28032-201ENSMUST00000184104 96 ntBASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Gm2345-201ENSMUST00000193451 589 ntBASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Gm5278-201ENSMUST00000055957 552 ntBASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp6nlQ80XC3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Gm24140-201ENSMUST00000122773 326 ntBASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Gm4943-201ENSMUST00000132879 424 ntBASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Mir1941-201ENSMUST00000157834 83 ntBASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Gm9574-201ENSMUST00000173127 845 ntBASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Gm38349-201ENSMUST00000195732 462 ntBASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 AC155300.1-201ENSMUST00000219134 480 ntBASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp6nlQ80XC3 Gm5472-201ENSMUST00000178604 1678 ntBASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Gm37688-201ENSMUST00000195195 465 ntBASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Gm3527-201ENSMUST00000198905 460 ntBASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Gm42689-201ENSMUST00000202403 404 ntBASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.03□□□□□ -0.48
Usp6nlQ80XC3 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms