Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Scaf4Q6PFF0 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 AC117648.1-201ENSMUST00000219777 2510 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm11411-201ENSMUST00000117951 719 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm9133-201ENSMUST00000118289 540 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm11450-201ENSMUST00000121144 333 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm27552-201ENSMUST00000183351 62 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm27844-201ENSMUST00000183613 62 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm6905-201ENSMUST00000205729 511 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm45867-201ENSMUST00000208201 2317 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.67□□□□□ -0.7
Scaf4Q6PFF0 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gm40414-201ENSMUST00000197608 481 ntBASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gm44323-201ENSMUST00000198689 129 ntBASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gm45186-201ENSMUST00000206874 478 ntBASIC10.66□□□□□ -0.7
Scaf4Q6PFF0 Gm44551-201ENSMUST00000208804 171 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms