Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm11573-201ENSMUST00000119956 394 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm18351-201ENSMUST00000188646 883 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm37720-201ENSMUST00000195497 1241 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm44315-201ENSMUST00000203041 219 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm8342-201ENSMUST00000209839 757 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm25880-201ENSMUST00000104331 132 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm12419-201ENSMUST00000116649 636 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm8531-201ENSMUST00000188319 893 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm8574-201ENSMUST00000203207 924 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm45594-201ENSMUST00000211717 241 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm45696-201ENSMUST00000212088 985 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm18165-201ENSMUST00000217426 928 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf1Q69ZI1 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf1Q69ZI1 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf1Q69ZI1 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.04□□□□□ -0.64
Sh3rf1Q69ZI1 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms