Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm12969-201ENSMUST00000120199 1004 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm13874-202ENSMUST00000135348 941 ntTSL 3 BASIC9.38□□□□□ -0.91
Znf48Q3US17 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir1956-201ENSMUST00000157748 65 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm2541-201ENSMUST00000161209 711 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm3307-201ENSMUST00000176164 632 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir669a-7-201ENSMUST00000180364 87 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm8343-201ENSMUST00000182705 994 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm37299-201ENSMUST00000193951 826 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir669a-6-201ENSMUST00000196127 87 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm9645-201ENSMUST00000197131 792 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir669a-12-201ENSMUST00000197274 87 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir669a-5-201ENSMUST00000197439 87 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm44329-201ENSMUST00000197469 112 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir669a-10-201ENSMUST00000197745 87 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir669a-11-201ENSMUST00000197952 87 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm18492-201ENSMUST00000198141 1018 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir669a-4-201ENSMUST00000198665 87 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir669a-9-201ENSMUST00000200087 87 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir669a-8-201ENSMUST00000200268 87 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm6290-201ENSMUST00000207666 1158 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm45120-201ENSMUST00000208880 408 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 n-R5s211-201ENSMUST00000093689 119 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.38□□□□□ -0.91
Znf48Q3US17 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Gm30655-201ENSMUST00000220498 1383 ntTSL 5 BASIC9.37□□□□□ -0.91
Znf48Q3US17 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.37□□□□□ -0.91
Znf48Q3US17 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.37□□□□□ -0.91
Znf48Q3US17 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Znf48Q3US17 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Znf48Q3US17 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Znf48Q3US17 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Znf48Q3US17 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Gm14098-201ENSMUST00000119295 623 ntBASIC9.37□□□□□ -0.91
Znf48Q3US17 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.37□□□□□ -0.91
Znf48Q3US17 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.37□□□□□ -0.91
Znf48Q3US17 Gm12327-201ENSMUST00000121729 1168 ntBASIC9.37□□□□□ -0.91
Znf48Q3US17 Gm15529-201ENSMUST00000121833 994 ntBASIC9.37□□□□□ -0.91
Znf48Q3US17 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.37□□□□□ -0.91
Znf48Q3US17 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC9.37□□□□□ -0.91
Znf48Q3US17 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Znf48Q3US17 Gm16571-201ENSMUST00000159112 291 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms