Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm15383-201ENSMUST00000121889 1443 ntBASIC9.99□□□□□ -0.81
Spg11Q3UHA3 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm16365-201ENSMUST00000122987 629 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm5459-201ENSMUST00000171235 798 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm9630-201ENSMUST00000178304 885 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm28179-201ENSMUST00000188365 613 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Ly6c1-206ENSMUST00000188845 784 ntAPPRIS ALT2 TSL 3 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm40414-201ENSMUST00000197608 481 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 AC161877.1-201ENSMUST00000227736 699 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm27403-201ENSMUST00000184662 214 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm38314-201ENSMUST00000195709 625 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 AC116797.2-203ENSMUST00000225290 565 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 AC154643.1-201ENSMUST00000225643 625 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 AC164883.7-201ENSMUST00000228534 851 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 AC161581.1-201ENSMUST00000228696 318 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Cib3-201ENSMUST00000098630 585 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm17980-201ENSMUST00000217977 2349 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Spg11Q3UHA3 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Vmn1r44-203ENSMUST00000226120 1772 ntBASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 n-R5s51-201ENSMUST00000104473 123 ntBASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Gm12004-201ENSMUST00000117869 718 ntBASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms