Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.09□□□□□ -0.95
SgcaP82350 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SgcaP82350 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.09□□□□□ -0.96
SgcaP82350 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
SgcaP82350 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.08□□□□□ -0.96
SgcaP82350 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
SgcaP82350 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Gm13392-201ENSMUST00000117708 150 ntBASIC9.08□□□□□ -0.96
SgcaP82350 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC9.08□□□□□ -0.96
SgcaP82350 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.08□□□□□ -0.96
SgcaP82350 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.08□□□□□ -0.96
SgcaP82350 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Gm27501-201ENSMUST00000183599 107 ntBASIC9.08□□□□□ -0.96
SgcaP82350 Gm27627-201ENSMUST00000183644 150 ntBASIC9.08□□□□□ -0.96
SgcaP82350 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.08□□□□□ -0.96
SgcaP82350 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.08□□□□□ -0.96
SgcaP82350 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SgcaP82350 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.08□□□□□ -0.96
SgcaP82350 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.08□□□□□ -0.96
SgcaP82350 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.08□□□□□ -0.96
SgcaP82350 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.08□□□□□ -0.96
SgcaP82350 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.08□□□□□ -0.96
SgcaP82350 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.08□□□□□ -0.96
SgcaP82350 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.08□□□□□ -0.96
SgcaP82350 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.08□□□□□ -0.96
SgcaP82350 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.08□□□□□ -0.96
SgcaP82350 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Sox5-205ENSMUST00000111749 3879 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Cemip-201ENSMUST00000064174 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.08□□□□□ -0.96
SgcaP82350 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
SgcaP82350 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.08□□□□□ -0.96
SgcaP82350 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
SgcaP82350 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SgcaP82350 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.07□□□□□ -0.96
SgcaP82350 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Exosc10-201ENSMUST00000017408 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.07□□□□□ -0.96
SgcaP82350 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
SgcaP82350 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.07□□□□□ -0.96
SgcaP82350 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
SgcaP82350 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.07□□□□□ -0.96
SgcaP82350 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms