Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC10.87□□□□□ -0.67
Atxn1P54254 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.87□□□□□ -0.67
Atxn1P54254 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.87□□□□□ -0.67
Atxn1P54254 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.87□□□□□ -0.67
Atxn1P54254 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.87□□□□□ -0.67
Atxn1P54254 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Atxn1P54254 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC10.87□□□□□ -0.67
Atxn1P54254 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC10.87□□□□□ -0.67
Atxn1P54254 AC134913.2-201ENSMUST00000225017 771 ntBASIC10.87□□□□□ -0.67
Atxn1P54254 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atxn1P54254 Gm25580-201ENSMUST00000083409 327 ntBASIC10.87□□□□□ -0.67
Atxn1P54254 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Atxn1P54254 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Atxn1P54254 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atxn1P54254 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.87□□□□□ -0.67
Atxn1P54254 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Atxn1P54254 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atxn1P54254 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atxn1P54254 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atxn1P54254 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atxn1P54254 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atxn1P54254 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atxn1P54254 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atxn1P54254 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Atxn1P54254 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atxn1P54254 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Atxn1P54254 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC10.86□□□□□ -0.67
Atxn1P54254 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atxn1P54254 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.86□□□□□ -0.67
Atxn1P54254 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atxn1P54254 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Atxn1P54254 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.86□□□□□ -0.67
Atxn1P54254 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Atxn1P54254 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Gm8302-201ENSMUST00000119217 852 ntBASIC10.86□□□□□ -0.67
Atxn1P54254 Gm11700-201ENSMUST00000119409 403 ntBASIC10.86□□□□□ -0.67
Atxn1P54254 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.86□□□□□ -0.67
Atxn1P54254 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.86□□□□□ -0.67
Atxn1P54254 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC10.86□□□□□ -0.67
Atxn1P54254 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC10.86□□□□□ -0.67
Atxn1P54254 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Atxn1P54254 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atxn1P54254 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Atxn1P54254 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Atxn1P54254 Gm30946-201ENSMUST00000198288 724 ntBASIC10.86□□□□□ -0.67
Atxn1P54254 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.86□□□□□ -0.67
Atxn1P54254 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.86□□□□□ -0.67
Atxn1P54254 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.86□□□□□ -0.67
Atxn1P54254 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC10.86□□□□□ -0.67
Atxn1P54254 AC154433.1-201ENSMUST00000224401 1183 ntBASIC10.86□□□□□ -0.67
Atxn1P54254 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC10.86□□□□□ -0.67
Atxn1P54254 n-R5s71-201ENSMUST00000093668 119 ntBASIC10.86□□□□□ -0.67
Atxn1P54254 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atxn1P54254 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Atxn1P54254 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.86□□□□□ -0.67
Atxn1P54254 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atxn1P54254 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.85□□□□□ -0.67
Atxn1P54254 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.85□□□□□ -0.67
Atxn1P54254 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Atxn1P54254 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Atxn1P54254 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.85□□□□□ -0.67
Atxn1P54254 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atxn1P54254 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.85□□□□□ -0.67
Atxn1P54254 Gm15626-201ENSMUST00000117478 868 ntBASIC10.85□□□□□ -0.67
Atxn1P54254 Gm15374-201ENSMUST00000119313 844 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms