Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm44647-201ENSMUST00000207402 428 ntBASIC9.06□□□□□ -0.96
Col8a2P25318 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC9.06□□□□□ -0.96
Col8a2P25318 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC9.06□□□□□ -0.96
Col8a2P25318 AC154176.1-201ENSMUST00000225897 220 ntBASIC9.06□□□□□ -0.96
Col8a2P25318 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Col8a2P25318 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Col8a2P25318 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Gm3372-201ENSMUST00000198806 1792 ntBASIC9.06□□□□□ -0.96
Col8a2P25318 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.06□□□□□ -0.96
Col8a2P25318 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.05□□□□□ -0.96
Col8a2P25318 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Col8a2P25318 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.05□□□□□ -0.96
Col8a2P25318 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Col8a2P25318 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
Col8a2P25318 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Gm24791-201ENSMUST00000104284 131 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Gm13019-201ENSMUST00000120000 276 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Gm14113-201ENSMUST00000121399 976 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Mir1893-201ENSMUST00000122565 83 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Gm9372-201ENSMUST00000168454 430 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Mir6387-201ENSMUST00000184042 108 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC9.05□□□□□ -0.96
Col8a2P25318 Gm37852-201ENSMUST00000193027 350 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Gm42433-201ENSMUST00000196806 940 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.05□□□□□ -0.96
Col8a2P25318 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Gm4903-201ENSMUST00000210462 405 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.05□□□□□ -0.96
Col8a2P25318 CT030195.2-201ENSMUST00000226074 1286 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.05□□□□□ -0.96
Col8a2P25318 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.05□□□□□ -0.96
Col8a2P25318 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Col8a2P25318 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Gm14005-210ENSMUST00000225087 1413 ntBASIC9.05□□□□□ -0.96
Col8a2P25318 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col8a2P25318 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Col8a2P25318 Gm5697-201ENSMUST00000122295 2482 ntBASIC9.04□□□□□ -0.96
Col8a2P25318 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Col8a2P25318 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col8a2P25318 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms