Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
P20040 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Gm4294-201ENSMUST00000105169 614 ntBASIC9.66□□□□□ -0.86
P20040 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.66□□□□□ -0.86
P20040 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Gm12516-201ENSMUST00000120819 385 ntBASIC9.66□□□□□ -0.86
P20040 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC9.66□□□□□ -0.86
P20040 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.66□□□□□ -0.86
P20040 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.66□□□□□ -0.86
P20040 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.66□□□□□ -0.86
P20040 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
P20040 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Mir7076-201ENSMUST00000183519 74 ntBASIC9.66□□□□□ -0.86
P20040 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC9.66□□□□□ -0.86
P20040 Gm37301-201ENSMUST00000195412 568 ntBASIC9.66□□□□□ -0.86
P20040 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Gm8285-201ENSMUST00000208293 759 ntBASIC9.66□□□□□ -0.86
P20040 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.66□□□□□ -0.86
P20040 Gm6722-201ENSMUST00000221586 390 ntBASIC9.66□□□□□ -0.86
P20040 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.66□□□□□ -0.86
P20040 AC165260.2-203ENSMUST00000224237 336 ntBASIC9.66□□□□□ -0.86
P20040 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
P20040 Gm23105-201ENSMUST00000083719 134 ntBASIC9.66□□□□□ -0.86
P20040 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.66□□□□□ -0.86
P20040 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Rims2-204ENSMUST00000226410 3685 ntBASIC9.66□□□□□ -0.86
P20040 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.66□□□□□ -0.86
P20040 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.66□□□□□ -0.86
P20040 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.66□□□□□ -0.86
P20040 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.66□□□□□ -0.86
P20040 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
P20040 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
P20040 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.65□□□□□ -0.86
P20040 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
P20040 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.65□□□□□ -0.86
P20040 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Gm16166-201ENSMUST00000118291 787 ntBASIC9.65□□□□□ -0.86
P20040 Gm11451-201ENSMUST00000118946 630 ntBASIC9.65□□□□□ -0.86
P20040 Gm16219-201ENSMUST00000120096 274 ntBASIC9.65□□□□□ -0.86
P20040 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.65□□□□□ -0.86
P20040 Gm14665-201ENSMUST00000122294 557 ntBASIC9.65□□□□□ -0.86
P20040 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.65□□□□□ -0.86
P20040 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC9.65□□□□□ -0.86
P20040 Gm10731-201ENSMUST00000181171 448 ntBASIC9.65□□□□□ -0.86
P20040 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.65□□□□□ -0.86
P20040 Gm37458-201ENSMUST00000194055 410 ntBASIC9.65□□□□□ -0.86
P20040 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.65□□□□□ -0.86
P20040 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC9.65□□□□□ -0.86
P20040 Gm17825-201ENSMUST00000206836 794 ntBASIC9.65□□□□□ -0.86
P20040 Gm2875-201ENSMUST00000211333 360 ntBASIC9.65□□□□□ -0.86
P20040 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC9.65□□□□□ -0.86
P20040 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC9.65□□□□□ -0.86
P20040 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P20040 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms