Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Fv4P11370 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.47□□□□□ -0.73
Fv4P11370 Gm16518-201ENSMUST00000117960 508 ntBASIC10.47□□□□□ -0.73
Fv4P11370 Gm13408-201ENSMUST00000119822 798 ntBASIC10.47□□□□□ -0.73
Fv4P11370 Gm13935-201ENSMUST00000121859 798 ntBASIC10.47□□□□□ -0.73
Fv4P11370 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.47□□□□□ -0.73
Fv4P11370 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.47□□□□□ -0.73
Fv4P11370 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.47□□□□□ -0.73
Fv4P11370 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Fv4P11370 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Gm44155-201ENSMUST00000203923 412 ntBASIC10.47□□□□□ -0.73
Fv4P11370 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.47□□□□□ -0.73
Fv4P11370 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.47□□□□□ -0.73
Fv4P11370 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.47□□□□□ -0.73
Fv4P11370 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.47□□□□□ -0.73
Fv4P11370 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.47□□□□□ -0.73
Fv4P11370 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Fv4P11370 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Fv4P11370 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Fv4P11370 AC144938.1-201ENSMUST00000223994 2167 ntBASIC10.46□□□□□ -0.73
Fv4P11370 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.46□□□□□ -0.73
Fv4P11370 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.73
Fv4P11370 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.73
Fv4P11370 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Fv4P11370 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Fv4P11370 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.46□□□□□ -0.73
Fv4P11370 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.46□□□□□ -0.73
Fv4P11370 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.46□□□□□ -0.73
Fv4P11370 Gm12566-201ENSMUST00000121479 359 ntBASIC10.46□□□□□ -0.73
Fv4P11370 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Gm5244-201ENSMUST00000164001 339 ntBASIC10.46□□□□□ -0.73
Fv4P11370 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.46□□□□□ -0.73
Fv4P11370 Gm19927-201ENSMUST00000185792 781 ntBASIC10.46□□□□□ -0.73
Fv4P11370 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.46□□□□□ -0.73
Fv4P11370 Gm37299-201ENSMUST00000193951 826 ntBASIC10.46□□□□□ -0.73
Fv4P11370 Gm43378-201ENSMUST00000199336 582 ntBASIC10.46□□□□□ -0.73
Fv4P11370 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.46□□□□□ -0.73
Fv4P11370 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.46□□□□□ -0.73
Fv4P11370 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.46□□□□□ -0.73
Fv4P11370 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Fv4P11370 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Fv4P11370 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.46□□□□□ -0.73
Fv4P11370 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.46□□□□□ -0.74
Fv4P11370 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Fv4P11370 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.46□□□□□ -0.74
Fv4P11370 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 Nln-205ENSMUST00000224945 2486 ntBASIC10.46□□□□□ -0.74
Fv4P11370 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Fv4P11370 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Fv4P11370 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms