Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.37□□□□□ -0.91
H3f3cP02301 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
H3f3cP02301 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.36□□□□□ -0.91
H3f3cP02301 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
H3f3cP02301 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.36□□□□□ -0.91
H3f3cP02301 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
H3f3cP02301 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
H3f3cP02301 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
H3f3cP02301 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
H3f3cP02301 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.36□□□□□ -0.91
H3f3cP02301 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.36□□□□□ -0.91
H3f3cP02301 Gm12986-201ENSMUST00000119037 967 ntBASIC9.36□□□□□ -0.91
H3f3cP02301 Gm12176-201ENSMUST00000121420 875 ntBASIC9.36□□□□□ -0.91
H3f3cP02301 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.36□□□□□ -0.91
H3f3cP02301 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.36□□□□□ -0.91
H3f3cP02301 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Gm42518-201ENSMUST00000196277 938 ntBASIC9.36□□□□□ -0.91
H3f3cP02301 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.36□□□□□ -0.91
H3f3cP02301 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
H3f3cP02301 Mirlet7i-201ENSMUST00000083472 85 ntBASIC9.36□□□□□ -0.91
H3f3cP02301 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.36□□□□□ -0.91
H3f3cP02301 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
H3f3cP02301 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
H3f3cP02301 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
H3f3cP02301 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
H3f3cP02301 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
H3f3cP02301 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
H3f3cP02301 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.35□□□□□ -0.91
H3f3cP02301 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.35□□□□□ -0.91
H3f3cP02301 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
H3f3cP02301 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.35□□□□□ -0.91
H3f3cP02301 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
H3f3cP02301 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.35□□□□□ -0.91
H3f3cP02301 Mir1901-201ENSMUST00000122616 78 ntBASIC9.35□□□□□ -0.91
H3f3cP02301 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC9.35□□□□□ -0.91
H3f3cP02301 Gm25343-201ENSMUST00000157460 107 ntBASIC9.35□□□□□ -0.91
H3f3cP02301 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Snord55-201ENSMUST00000174939 79 ntBASIC9.35□□□□□ -0.91
H3f3cP02301 Gm9369-201ENSMUST00000196009 733 ntBASIC9.35□□□□□ -0.91
H3f3cP02301 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
H3f3cP02301 Gm45594-201ENSMUST00000211717 241 ntBASIC9.35□□□□□ -0.91
H3f3cP02301 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms