Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
CopeO89079 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
CopeO89079 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.14□□□□□ -0.63
CopeO89079 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.14□□□□□ -0.63
CopeO89079 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC11.14□□□□□ -0.63
CopeO89079 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.14□□□□□ -0.63
CopeO89079 Gm23251-201ENSMUST00000103773 110 ntBASIC11.14□□□□□ -0.63
CopeO89079 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CopeO89079 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Gm9133-201ENSMUST00000118289 540 ntBASIC11.14□□□□□ -0.63
CopeO89079 Gm15352-201ENSMUST00000118696 270 ntBASIC11.14□□□□□ -0.63
CopeO89079 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.14□□□□□ -0.63
CopeO89079 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.14□□□□□ -0.63
CopeO89079 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.14□□□□□ -0.63
CopeO89079 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
CopeO89079 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.14□□□□□ -0.63
CopeO89079 Mir1938-201ENSMUST00000158746 100 ntBASIC11.14□□□□□ -0.63
CopeO89079 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Gm28450-201ENSMUST00000187349 638 ntBASIC11.14□□□□□ -0.63
CopeO89079 Gm10774-201ENSMUST00000188689 204 ntBASIC11.14□□□□□ -0.63
CopeO89079 Gm44315-201ENSMUST00000203041 219 ntBASIC11.14□□□□□ -0.63
CopeO89079 Gm45310-201ENSMUST00000210436 275 ntBASIC11.14□□□□□ -0.63
CopeO89079 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.14□□□□□ -0.63
CopeO89079 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.14□□□□□ -0.63
CopeO89079 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.14□□□□□ -0.63
CopeO89079 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC11.14□□□□□ -0.63
CopeO89079 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CopeO89079 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
CopeO89079 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
CopeO89079 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CopeO89079 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
CopeO89079 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.13□□□□□ -0.63
CopeO89079 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.13□□□□□ -0.63
CopeO89079 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Snord55-201ENSMUST00000174939 79 ntBASIC11.13□□□□□ -0.63
CopeO89079 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.13□□□□□ -0.63
CopeO89079 Gm44323-201ENSMUST00000198689 129 ntBASIC11.13□□□□□ -0.63
CopeO89079 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.13□□□□□ -0.63
CopeO89079 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.13□□□□□ -0.63
CopeO89079 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Gm5451-201ENSMUST00000080545 579 ntBASIC11.13□□□□□ -0.63
CopeO89079 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CopeO89079 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
CopeO89079 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.13□□□□□ -0.63
CopeO89079 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CopeO89079 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CopeO89079 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CopeO89079 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CopeO89079 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CopeO89079 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CopeO89079 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CopeO89079 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
CopeO89079 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CopeO89079 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CopeO89079 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms