Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm13035-201ENSMUST00000117496 342 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm14395-201ENSMUST00000120494 563 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 AU022133-201ENSMUST00000200601 873 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm18056-201ENSMUST00000207670 568 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm18061-201ENSMUST00000208350 562 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm18063-201ENSMUST00000208529 568 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm18052-201ENSMUST00000208750 559 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 AC154634.3-201ENSMUST00000224589 736 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
Pcdh1F7BJK1 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm14058-201ENSMUST00000116082 735 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm12419-201ENSMUST00000116649 636 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm7857-201ENSMUST00000117957 358 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm11450-201ENSMUST00000121144 333 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm27552-201ENSMUST00000183351 62 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm27844-201ENSMUST00000183613 62 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Mir7051-201ENSMUST00000184167 73 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm43377-201ENSMUST00000201640 455 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Pcdh1F7BJK1 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms