Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Glns-ps1-201ENSMUST00000120291 1118 ntBASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Gm16548-201ENSMUST00000133341 1226 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Gnb2-214ENSMUST00000168746 802 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Gm20945-201ENSMUST00000178122 1145 ntBASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Mkln1os-201ENSMUST00000139185 1864 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 AC125487.1-201ENSMUST00000217888 1300 ntBASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Gm6425-201ENSMUST00000136332 790 ntBASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Gm7672-201ENSMUST00000180915 872 ntBASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Gm37559-201ENSMUST00000193556 832 ntBASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Gm18466-201ENSMUST00000209147 499 ntBASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Gm19045-201ENSMUST00000222488 1193 ntBASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Arl15-202ENSMUST00000224068 1002 ntBASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Gm31763-202ENSMUST00000218205 1724 ntBASIC10.71□□□□□ -0.7
Cdh23Q99PF4 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdh23Q99PF4 Gm44547-201ENSMUST00000207793 1446 ntBASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Gm22987-201ENSMUST00000122757 246 ntBASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Gm10251-202ENSMUST00000181786 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Gm12452-201ENSMUST00000117128 331 ntBASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Gm43625-201ENSMUST00000199177 1539 ntBASIC10.7□□□□□ -0.7
Cdh23Q99PF4 AC140209.1-203ENSMUST00000227412 1524 ntBASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdh23Q99PF4 Fuom-202ENSMUST00000120034 680 ntTSL 3 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm15580-201ENSMUST00000121587 556 ntBASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm23497-201ENSMUST00000157738 130 ntBASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 AC162940.1-201ENSMUST00000224745 1167 ntBASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Ccdc173-201ENSMUST00000094942 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdh23Q99PF4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms