Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC154461.1-201ENSMUST00000224207 1005 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm5424-201ENSMUST00000053865 1240 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm8872-201ENSMUST00000197475 1341 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.56□□□□□ -0.56
Clp1Q99LI9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Clp1Q99LI9 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gm12716-201ENSMUST00000120606 1354 ntBASIC11.55□□□□□ -0.56
Clp1Q99LI9 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.55□□□□□ -0.56
Clp1Q99LI9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gm14176-201ENSMUST00000121302 477 ntBASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gm7805-201ENSMUST00000154348 448 ntBASIC11.55□□□□□ -0.56
Clp1Q99LI9 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC11.55□□□□□ -0.56
Clp1Q99LI9 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gm26943-201ENSMUST00000182295 957 ntBASIC11.55□□□□□ -0.56
Clp1Q99LI9 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gm43866-201ENSMUST00000203894 839 ntBASIC11.55□□□□□ -0.56
Clp1Q99LI9 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.55□□□□□ -0.56
Clp1Q99LI9 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Clp1Q99LI9 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.55□□□□□ -0.56
Clp1Q99LI9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clp1Q99LI9 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clp1Q99LI9 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms