Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.23□□□□□ -0.61
Trim60Q8VI40 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Gm12165-201ENSMUST00000117047 342 ntBASIC11.23□□□□□ -0.61
Trim60Q8VI40 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.23□□□□□ -0.61
Trim60Q8VI40 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.23□□□□□ -0.61
Trim60Q8VI40 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.23□□□□□ -0.61
Trim60Q8VI40 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.23□□□□□ -0.61
Trim60Q8VI40 Gm3786-201ENSMUST00000202659 378 ntBASIC11.23□□□□□ -0.61
Trim60Q8VI40 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.23□□□□□ -0.61
Trim60Q8VI40 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.23□□□□□ -0.61
Trim60Q8VI40 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim60Q8VI40 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.22□□□□□ -0.61
Trim60Q8VI40 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.22□□□□□ -0.61
Trim60Q8VI40 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.22□□□□□ -0.61
Trim60Q8VI40 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.22□□□□□ -0.61
Trim60Q8VI40 Gm17831-201ENSMUST00000205579 900 ntBASIC11.22□□□□□ -0.61
Trim60Q8VI40 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trim60Q8VI40 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.22□□□□□ -0.61
Trim60Q8VI40 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.22□□□□□ -0.61
Trim60Q8VI40 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.22□□□□□ -0.61
Trim60Q8VI40 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.22□□□□□ -0.61
Trim60Q8VI40 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim60Q8VI40 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms