Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Gm43380-201ENSMUST00000200421 220 ntBASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Gm44126-201ENSMUST00000204831 514 ntBASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim29Q8R2Q0 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Spata33-207ENSMUST00000212760 4074 ntBASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm11952-201ENSMUST00000121172 821 ntBASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm30671-201ENSMUST00000214898 318 ntBASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim29Q8R2Q0 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Mir1893-201ENSMUST00000122565 83 ntBASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gm38321-201ENSMUST00000195053 235 ntBASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gm9369-201ENSMUST00000196009 733 ntBASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gm44545-201ENSMUST00000208262 746 ntBASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim29Q8R2Q0 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms