Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm15004-201ENSMUST00000119192 630 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm12196-201ENSMUST00000120954 262 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm27552-201ENSMUST00000183351 62 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm27844-201ENSMUST00000183613 62 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm27441-201ENSMUST00000185000 105 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm3332-201ENSMUST00000189337 928 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Mettl6-204ENSMUST00000227595 1027 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Tsen54Q8C2A2 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Gm23200-201ENSMUST00000104379 132 ntBASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Gm12857-201ENSMUST00000117678 592 ntBASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Gm25881-201ENSMUST00000157783 103 ntBASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Gm24074-201ENSMUST00000158178 260 ntBASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 AU022133-201ENSMUST00000200601 873 ntBASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Tsen54Q8C2A2 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms