Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 CU025215.1-201ENSMUST00000222986 603 ntBASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 AC154433.1-201ENSMUST00000224401 1183 ntBASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Gm8615-201ENSMUST00000025307 771 ntBASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm38034-201ENSMUST00000193915 2069 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm22751-201ENSMUST00000102077 109 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Mir692-3-201ENSMUST00000102079 109 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Mir692-2-201ENSMUST00000102081 109 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm8464-202ENSMUST00000146697 1142 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm4750-201ENSMUST00000151942 1142 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm5873-201ENSMUST00000177157 1066 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm44388-201ENSMUST00000204350 258 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm2716-201ENSMUST00000212350 643 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm8557-201ENSMUST00000220777 475 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 AC107711.3-201ENSMUST00000228939 1035 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx55Q6ZPL9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm15373-201ENSMUST00000121495 214 ntBASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 Gm14829-201ENSMUST00000121499 1138 ntBASIC12.37□□□□□ -0.43
Ddx55Q6ZPL9 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms