Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm24981-201ENSMUST00000104459 132 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm4812-201ENSMUST00000182847 993 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Mir6360-201ENSMUST00000184278 126 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm28916-201ENSMUST00000186988 699 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm2316-201ENSMUST00000190613 921 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm8615-201ENSMUST00000025307 771 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Gm25591-201ENSMUST00000177317 94 ntBASIC12.61□□□□□ -0.39
Nup98Q6PFD9 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Gm5189-201ENSMUST00000221796 261 ntBASIC12.61□□□□□ -0.39
Nup98Q6PFD9 AC157650.1-201ENSMUST00000224582 610 ntBASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nup98Q6PFD9 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm15032-201ENSMUST00000118547 411 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm4943-201ENSMUST00000132879 424 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm11771-201ENSMUST00000118124 732 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm12733-201ENSMUST00000119871 767 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm6276-201ENSMUST00000120159 579 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm11824-201ENSMUST00000120191 846 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm5501-201ENSMUST00000165917 832 ntBASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup98Q6PFD9 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms