Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Ginm1-202ENSMUST00000065124 300 ntBASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Smarcd3Q6P9Z1 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smarcd3Q6P9Z1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Gm13328-201ENSMUST00000120816 1020 ntBASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Gm7985-201ENSMUST00000183329 981 ntBASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Gm5468-202ENSMUST00000227851 682 ntBASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smarcd3Q6P9Z1 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Gm23061-201ENSMUST00000102348 116 ntBASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Gm14395-201ENSMUST00000120494 563 ntBASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Gm4917-201ENSMUST00000121452 650 ntBASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 AC155637.1-201ENSMUST00000218560 636 ntBASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Smarcd3Q6P9Z1 Gm23105-201ENSMUST00000083719 134 ntBASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms