Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Gm12795-201ENSMUST00000117594 539 ntBASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Gm14497-201ENSMUST00000119537 580 ntBASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Gm11675-201ENSMUST00000121873 832 ntBASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Gm25226-201ENSMUST00000158198 123 ntBASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Gm44155-201ENSMUST00000203923 412 ntBASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 AC124581.2-201ENSMUST00000225459 282 ntBASIC12.15□□□□□ -0.46
Usp49Q6P9L4 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.15□□□□□ -0.46
Usp49Q6P9L4 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp49Q6P9L4 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Usp49Q6P9L4 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Usp49Q6P9L4 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Usp49Q6P9L4 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Usp49Q6P9L4 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Gm7985-201ENSMUST00000183329 981 ntBASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Gm29155-201ENSMUST00000185910 269 ntBASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Gm7880-201ENSMUST00000203748 871 ntBASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Usp49Q6P9L4 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.13□□□□□ -0.47
Usp49Q6P9L4 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms