Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm42858-201ENSMUST00000202512 1704 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm22709-201ENSMUST00000116893 111 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm14539-201ENSMUST00000117527 174 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm14113-201ENSMUST00000121399 976 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm24074-201ENSMUST00000158178 260 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm16547-201ENSMUST00000159474 293 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm17889-201ENSMUST00000198410 598 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm43066-201ENSMUST00000199589 1260 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm8170-201ENSMUST00000218581 945 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 CT009713.1-201ENSMUST00000224828 853 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.66□□□□□ -0.38
Rc3h1Q4VGL6 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm14659-201ENSMUST00000117667 843 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm11957-201ENSMUST00000118304 779 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm11979-201ENSMUST00000119629 743 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm23400-201ENSMUST00000174994 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm26463-201ENSMUST00000175065 101 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm24332-201ENSMUST00000175102 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm25959-201ENSMUST00000175112 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm22475-201ENSMUST00000175169 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm22903-201ENSMUST00000175193 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm25070-201ENSMUST00000175237 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm24159-201ENSMUST00000175264 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm25299-201ENSMUST00000175283 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm23798-201ENSMUST00000175560 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm23802-201ENSMUST00000175565 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm25708-201ENSMUST00000177687 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm24370-201ENSMUST00000178007 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm23049-201ENSMUST00000178068 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm28019-201ENSMUST00000178138 101 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm25571-201ENSMUST00000178322 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm25355-201ENSMUST00000178456 101 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm24975-201ENSMUST00000178492 101 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm23189-201ENSMUST00000178954 102 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm25100-201ENSMUST00000179750 101 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm23064-201ENSMUST00000179866 101 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm18801-201ENSMUST00000186616 536 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms